Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
2C2I Chain:A ((2-150))
-RTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYV-
General information:
TITO was launched using:
RESULT:
Template:
2C2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41295 for 1096 contacts (-37.7/contact) +
2D Compatibility (PS) -16238 + (NN) -5761 + (LL) 300
1D Compatibility (HY) -3200 + (ID) 3600
Total energy: -69794.0 ( -63.68 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_2C2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C2I-query.scw
PDB file :
Tito_Scwrl_2C2I.pdb
: