Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGE-VRAMVRPAANTRSIDDLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRGHVATEEDR--VDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGRLP-FTMRGIRLEAVGVDDAARALILAAERGRNGERYLISERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEESIREAARFWAAMRTVGKDPAAS |
| 3WJ7 Chain:A ((13-335)) | -NDVTLVTGATGFVGSAVARVL-----EERGHRLRLLVRPTSDRSNIAELNAELAVGDLSDPDTLAPALKGVKILFHVAADYRLWVPDPETMMKANVEGTRNLMLAALEAGVEKIIYCSSVAALGLRSDGVPADETTPVSESQVIGIYKLSKYRAEQEVLRLIREKNLPAIIVNPSTPVGPRDIKPTPTGQMILDCASGNMPAYVETGLNI--VHVDDVAEGHALALERGKIGEKYILGGENIMLGDLFRMVSQIAGVKPPAVKLKQSWLYPVALVSEWLARGFGIEPRVTRETLAMSKKLMFFSSDKAKKELGYAPRPARDAVTDAIAWF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173040 for 2669 contacts (-64.8/contact) +
2D Compatibility (PS) -34543 + (NN) -16259 + (LL) 1692
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -247950.0 ( -92.90 by residue)
QMean score : 0.538
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