Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
1M44 Chain:A ((5-181))
----VHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
General information:
TITO was launched using:
RESULT:
Template:
1M44.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130600 for 1380 contacts (-94.6/contact) +
2D Compatibility (PS) -18849 + (NN) -7471 + (LL) 424
1D Compatibility (HY) -24000 + (ID) 8850
Total energy: -189346.0 ( -137.21 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1M44.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M44-query.scw
PDB file :
Tito_Scwrl_1M44.pdb
: