Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTAASLP--GVEMVTATVAHIDIAAQVVHT---DNSVIG--YDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVPFK--------------------CPAAPFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTSEPFDLLAVVPPHVPSAAARSAG---LSESGWIPVDPRTLSTSADNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHFTGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
| 3H8I Chain:A ((2-350)) | -TK-VLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEA-LPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEF-----ATKLREKLESFQGGNIA--IGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEY-LSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDE--KGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMT------VPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYPTIVC-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H8I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -239638 for 2666 contacts (-89.9/contact) +
2D Compatibility (PS) -34724 + (NN) -11723 + (LL) 3088
1D Compatibility (HY) -22800 + (ID) 4450
Total energy: -310247.0 ( -116.37 by residue)
QMean score : 0.431
|
|
|