Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMTLKVAIGPQNAFVLRQGIRREYVLVIVALCGIADGALIAAGVGGFAALIHAHPNMTLVARFGGAAFLIGYALLAARNAWRPSGLVPSESGPAALIGVVQ------MCLVVTF---LNPHVYLDTVVLIGALANEESDLRWFFGAGAWAASVVWFAVLGFSAGRLQPFFATPAAWRILDALVAVTMIGVAVVVLVTSPSVPTANVALII |
3JRU Chain:B ((322-375)) | ------------------------------------------------------------------------------NAYRPSDVITSMSGKTIEVGNTDAEGRLILCDALTYAERFNPEALVDVATLTGA------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11553 for 168 contacts (-68.8/contact) +
2D Compatibility (PS) -4783 + (NN) -1662 + (LL) 14368
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -5680.0 ( -33.81 by residue)
QMean score : -0.197
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