Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIRIGTRGSLLATTQAATVRDALIAG--GHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH
2YPN Chain:A ((5-303))VLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV---------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELI-----DGEIW----LRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL-----


General information:
TITO was launched using:
RESULT:

Template: 2YPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -131582 for 2382 contacts (-55.2/contact) +
2D Compatibility (PS) -30934 + (NN) -20497 + (LL) 1692
1D Compatibility (HY) -21200 + (ID) 6350
Total energy: -208871.0 ( -87.69 by residue)
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_2YPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPN-query.scw
PDB file : Tito_Scwrl_2YPN.pdb: