Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGTSSMGLPPGPRLSGSVQAVLMLRHGLRFLTACQRRYGSVFTLHVAGFGHMVYLSDPAAIKTVFAGNPSVFHAGEANSMLAGLLGDSSLLLIDDDVHRDRRRLMSPPFHRDAVARQAGPIAEIAAANIAGWPMAKAFAVAPKMSEITLEVILRTVIG---ASDPVRLAALRKVMPRLLNVGPWATLALANPSLLNNRLWSRLRRRIEEADALLYAE----IADRRADPDLAARTDTLAMLVRAADEDGRTMTERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGDPAGDE------YLDAVAKETLRIRPVVYDVGRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRMV---GATLS-PTTWLPFGGGNRRCLGATFAMVEMRVVLREILRRVE--------LSTTTTSGERPKLKHVIMVPHRGARIRVRATRDVSATSQATAQGAGCPAARGGGPSRAVGSQ |
| 2VE3 Chain:A ((9-433)) | ----NSLPIPPGDFGLPWLGETLNFLNDGDFGKKRQQQFGPIFKTRLFG-KNVIFISGALANRFLFTKEQETFQATWPLSTRI-LLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLFPWFETYIQGLFSL----------PIPLPNTLFGKSQR----ARALLLAELEKIIKARQQQP--PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPK-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183244 for 3210 contacts (-57.1/contact) +
2D Compatibility (PS) -43945 + (NN) -27434 + (LL) 3892
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -281031.0 ( -87.55 by residue)
QMean score : 0.440
|
|
|