Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
4XGQ Chain:A ((2-132))
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
General information:
TITO was launched using:
RESULT:
Template:
4XGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70440 for 1022 contacts (-68.9/contact) +
2D Compatibility (PS) -14224 + (NN) -4997 + (LL) 0
1D Compatibility (HY) -16800 + (ID) 6550
Total energy: -113011.0 ( -110.58 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_4XGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGQ-query.scw
PDB file :
Tito_Scwrl_4XGQ.pdb
: