Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
4FN8 Chain:A ((2-230))
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEF--
General information:
TITO was launched using:
RESULT:
Template:
4FN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173366 for 1992 contacts (-87.0/contact) +
2D Compatibility (PS) -25487 + (NN) -12573 + (LL) 4
1D Compatibility (HY) -30000 + (ID) 11450
Total energy: -252872.0 ( -126.94 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4FN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FN8-query.scw
PDB file :
Tito_Scwrl_4FN8.pdb
: