Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELELTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
4OF1 Chain:A ((2-112))
IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL
General information:
TITO was launched using:
RESULT:
Template:
4OF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66195 for 737 contacts (-89.8/contact) +
2D Compatibility (PS) -11233 + (NN) -3630 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -90458.0 ( -122.74 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_4OF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OF1-query.scw
PDB file :
Tito_Scwrl_4OF1.pdb
: