Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
4Z0M Chain:A ((3-243))
--DLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRF--------------------
General information:
TITO was launched using:
RESULT:
Template:
4Z0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140373 for 2041 contacts (-68.8/contact) +
2D Compatibility (PS) -26902 + (NN) -13966 + (LL) 696
1D Compatibility (HY) -30400 + (ID) 12050
Total energy: -222995.0 ( -109.26 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4Z0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z0M-query.scw
PDB file :
Tito_Scwrl_4Z0M.pdb
: