Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSIRETGE
1ROF Chain:A ((1-60))
--MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCA---KDAADSCPTGAISVEE---
General information:
TITO was launched using:
RESULT:
Template:
1ROF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22515 for 444 contacts (-50.7/contact) +
2D Compatibility (PS) -6096 + (NN) -3904 + (LL) 244
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -36521.0 ( -82.25 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1ROF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ROF-query.scw
PDB file :
Tito_Scwrl_1ROF.pdb
: