Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGRGRLGH
2QBV Chain:A ((28-100))
---------------------------EIDTLREEIDRLDAEILALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPDGKDLAILLLRLGR-----
General information:
TITO was launched using:
RESULT:
Template:
2QBV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1211 for 369 contacts (-3.3/contact) +
2D Compatibility (PS) -8377 + (NN) -5167 + (LL) 1692
1D Compatibility (HY) -9600 + (ID) 3650
Total energy: -26313.0 ( -71.31 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2QBV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QBV-query.scw
PDB file :
Tito_Scwrl_2QBV.pdb
: