Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGDCPRSRTVRWSWDTGHVTAEPQPTPRPAKPRLLQDGRDMFWSLAPLVVGCILLAGLVGMCSFQLGGTKRGPIPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRADPATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIHPSMYPTGTVDVGGTRWVVYEGSDENGAVEPVWTTRLTGPGGATQLAITGAGSIDQFRTLASATQSQPPLPAR |
3HAG Chain:A ((432-486)) | ---DLGESRVVIQDYDNQHEQDRPTPSPAPSRPFSVLRANDVLW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4933 for 115 contacts (42.9/contact) +
2D Compatibility (PS) -4493 + (NN) -7221 + (LL) 7260
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -1771.0 ( -15.40 by residue)
QMean score : 0.478
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