Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCSRMADEPRLEAGAHPFEEGRDKAPELRATQMDHVRFTEGRRERNRDRLERSQQFRQPGR
4YFB Chain:B ((8-19))
-----------------FEPGRTRAPSLQ--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4YFB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 941 for 26 contacts (36.2/contact) +
2D Compatibility (PS) -1051 + (NN) 934 + (LL) 3056
1D Compatibility (HY) -800 + (ID) 350
Total energy: 2730.0 ( 105.00 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_4YFB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YFB-query.scw
PDB file :
Tito_Scwrl_4YFB.pdb
: