Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGA----TLIAGLDMDSDIEVV---DLMALDSSKLTPADWDRIGAAVQEAF-RGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLG----FTSGGVRLTRTKTRPYL----GDLGAAVA-PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEA-------GAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
| 1WSA Chain:A ((5-318)) | -------------QVTILATGGTIAG----------YSAGAVTVDKLLAAVPAINDLATIKGEQISSIGSQEMTGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTVKSQKPVVLVGAMRPGSSMSADGPMNLYNAVNVAINKASTNKGVVIVMNDEIHAAREATKLNTTAVNAFASPNTGKIGTVYYGKVEYFTQSVRPHTLASEFDISKIEELPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGNGNPFPLTQNALEKAAKSG---VVVARSSRV---------GSGSTTQEAEVDDKKLGFVATESLNPQKARVLLMLALTKTS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214166 for 2400 contacts (-89.2/contact) +
2D Compatibility (PS) -31686 + (NN) -23930 + (LL) 1240
1D Compatibility (HY) -15600 + (ID) 4850
Total energy: -288992.0 ( -120.41 by residue)
QMean score : 0.476
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