Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MACGVGISGCAIGSAIVLASIVAGVIDPANPGMAGLRRWLGPLSILLVLWGLRASIQWLQARLAQRGASAVIADLSGQV---LTAVTARRPSQLAAQRDAAAVL--ITRGLDGLRPYFTGYLPTLLLAAILTPATVAVIGLYDLKSMAIVVITLPLIPIFMVLIGL------ATTNPSAAALAAMTAVQARLLDLIAGIPTLRALGRASGPEQRIAELSADHRRSAMATLRIAFLSALVLELLATLGVALVAVGIGLRLVFGEMSLTAGLTVLLLAPEV------YWPLRRVGVQFHAAADGRTAADKAFALLGESPSPTPG--RRTVTARGGVIRLERLSVRGRDGRAPY--DLTADIEPGRVTVLTGRNGAGKSTTLQAIAGLTAPSSGRITVAGVDVTNLAPAAWWRQLSWLPQRPVLVPGTVRHNLVLLGPV----DDLERACAAAGFDAVLDELPRGLDTVLGRGGVGLSLGQRQRLGLARALGSPAAVLLLDEPTAHLDARTEQHVLGAIVERARAGATVLVVAHRQQVAAAGDRVVEVNSDGFRR |
2HYD Chain:A ((67-550)) | ---------------------------------------------LFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSAR----FYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVK---LTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAE---VQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIG-PIIVIGVG-----AYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMN-LPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESES-IIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIEN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205724 for 3350 contacts (-61.4/contact) +
2D Compatibility (PS) -51348 + (NN) -35214 + (LL) 4504
1D Compatibility (HY) -38400 + (ID) 5800
Total energy: -331982.0 ( -99.10 by residue)
QMean score : 0.374
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