Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYPLGEALLALYRWRGPLINAGVGGHGYTYLLGAEANRFVFANADAFSWSQTFESLVPVDGPTALIVSDGADHRRRRSVVAPGLRHHHVQRYVATMVSNIDTVIDGWQPGQRLDIYQE-LRSAVRRSTAESLFGQRLAVHSDFLGEQLQPLL-DLTRRPPQVMRLQQRVNSPGWRRAMAARKRIDDLIDAQIADARTAPRPDDHMLTTLISGCSEEGTTLSDNEIRDSIVSLITAGYETTSGALAWAIYALLTVPGTWESAASEVARVLGGRVPAADDLSALTYLNGVVHETLRLYSPGVISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPN-AADYRKPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLPAQRTHRIRAANFAALRPWPGLTVEIRKSAPAQ |
| 3DBG Chain:A ((42-451)) | -RDPL--AFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPDY------------------------------RRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRG------------------------DALADLHLLVDEIIAERRASGQKPDDLLTALLEA--------GEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPK---YAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVG--ITLRP--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215734 for 2782 contacts (-77.5/contact) +
2D Compatibility (PS) -36610 + (NN) -16370 + (LL) 4688
1D Compatibility (HY) -12800 + (ID) 5000
Total energy: -281826.0 ( -101.30 by residue)
QMean score : 0.410
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