Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDSAPFTDRLVRKFRLPVTGWRGK
1U0R Chain:A ((4-305))
---HRSVLLVVHT----ATETARRVEKVLGDNKIALRVLSAEAV-----------------EIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDSAPFTDRLVRKFRLPVTGWR--
General information:
TITO was launched using:
RESULT:
Template:
1U0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -225128 for 2371 contacts (-95.0/contact) +
2D Compatibility (PS) -30875 + (NN) -14530 + (LL) 1004
1D Compatibility (HY) -40800 + (ID) 14050
Total energy: -324379.0 ( -136.81 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1U0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U0R-query.scw
PDB file :
Tito_Scwrl_1U0R.pdb
: