Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
1MK1 Chain:A ((6-207))
-----FETISSETLHTGAIFALRRDQVR-----IVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGR----------TMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
General information:
TITO was launched using:
RESULT:
Template:
1MK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102822 for 1396 contacts (-73.7/contact) +
2D Compatibility (PS) -19924 + (NN) -3378 + (LL) 656
1D Compatibility (HY) -25200 + (ID) 9300
Total energy: -159968.0 ( -114.59 by residue)
QMean score : 0.796
(partial model without unconserved sides chains):
PDB file :
Tito_1MK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MK1-query.scw
PDB file :
Tito_Scwrl_1MK1.pdb
: