Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
4WSP Chain:A ((5-87))
----QSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNP----VPEIGDELSVARALSDLGKRMLKVSTHDIEAVTH-------
General information:
TITO was launched using:
RESULT:
Template:
4WSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9349 for 463 contacts (-20.2/contact) +
2D Compatibility (PS) -8228 + (NN) 692 + (LL) 772
1D Compatibility (HY) -10000 + (ID) 3950
Total energy: -30063.0 ( -64.93 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_4WSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WSP-query.scw
PDB file :
Tito_Scwrl_4WSP.pdb
: