Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLYLGYRNDDA--DTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALL--AFDDAASIVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTV----SICARLGSADAP-VDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVS--ESTARNLLVYCAQEMNHLAGFLADLWESFGDE |
| 3HWP Chain:A ((27-298)) | ------LFLRNQAAVRNKPYAKYFRSEMR-VPLSAVRKIQQGPMALEDTLTPSIEDINRLLEPDFVSEESGYALLPGPMAYVQSRKFFPGCTAQMFKWWFIWHPAESERYTLWFPYAHVSNPCVHHQRLRDESLSFEERLYGNTFCASEYVGDRLMHLHIDFQQPASLGLNTDLYREAKIDGSVSALMSLADHPEVPVSLMVHLFKEVPDGMYLTSRYWVGA-HPSMARFPG-AEKAASLLKENGFGEAELETLAYEFAVHDMCEFNHLASFLPDLYREFG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103450 for 2061 contacts (-50.2/contact) +
2D Compatibility (PS) -27636 + (NN) -11312 + (LL) 456
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -164692.0 ( -79.91 by residue)
QMean score : 0.428
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