Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTRPREIYLATAVSIGILLSLIAPLGPPLARADGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
2F6L Chain:A ((34-199))
---------------------------------DGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
General information:
TITO was launched using:
RESULT:
Template:
2F6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48502 for 1190 contacts (-40.8/contact) +
2D Compatibility (PS) -18011 + (NN) -12782 + (LL) 2808
1D Compatibility (HY) -18000 + (ID) 8300
Total energy: -102787.0 ( -86.38 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_2F6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6L-query.scw
PDB file :
Tito_Scwrl_2F6L.pdb
: