Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRELVTTAAITGAAIGGAPVAGADPQRYDGDVPGMNYDASLGAPCSSWERFIFGRGPSGQAEACHFPPPNQFPPAETGYWVISYPLYGVQQVGAPCPKPQAAAQSPDGLPMLCLGARGWQPGWFTGAGFFPPEP
3B07 Chain:B ((180-209))
---------------------------------------------VSAYDQYLFAQDPTGPAARDYFVPDNQLPP------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2208 for 115 contacts (-19.2/contact) +
2D Compatibility (PS) -3335 + (NN) -7067 + (LL) 3788
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -11772.0 ( -102.37 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_3B07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B07-query.scw
PDB file :
Tito_Scwrl_3B07.pdb
: