Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
3M9D Chain:G ((21-51))
--------------------STAAGQERREKLTEETDDLLDEIDDVLEENA-------------
General information:
TITO was launched using:
RESULT:
Template:
3M9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5492 for 122 contacts (45.0/contact) +
2D Compatibility (PS) -3543 + (NN) -1510 + (LL) 764
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -2747.0 ( -22.52 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_3M9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M9D-query.scw
PDB file :
Tito_Scwrl_3M9D.pdb
: