Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRRAGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
2KFS Chain:A ((1-145))
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRRAGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMA-
General information:
TITO was launched using:
RESULT:
Template:
2KFS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84591 for 1046 contacts (-80.9/contact) +
2D Compatibility (PS) -15498 + (NN) -7969 + (LL) 92
1D Compatibility (HY) -18000 + (ID) 7250
Total energy: -133216.0 ( -127.36 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2KFS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KFS-query.scw
PDB file :
Tito_Scwrl_2KFS.pdb
: