Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
1U2P Chain:A ((4-159))
---PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLAR----
General information:
TITO was launched using:
RESULT:
Template:
1U2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122235 for 1334 contacts (-91.6/contact) +
2D Compatibility (PS) -17039 + (NN) -9184 + (LL) -316
1D Compatibility (HY) -19200 + (ID) 7800
Total energy: -175774.0 ( -131.76 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1U2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U2P-query.scw
PDB file :
Tito_Scwrl_1U2P.pdb
: