Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWDKPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIK-ASHFIQEDSGTELAERMLSWQQAT |
4MJ3 Chain:A ((2-301)) | -DVLRTPDERFTALPDFPFAPRYVEVDSGDGGTLRMHYLDEGRSDGEVVLLLHGEPSWSYLYRWMIPVLVEAGLRAVAIDLVGFGRSDKPTSRDDYTYQAHVDWMWAAIEEIGLADVTLVCQDWGGLIGLRLVGEHPDRFARVVAANTMLPTGDHHPGEAFLAWQKFSQEVPLFPAGQIVNGGSLSTLSAETIAAYDAPFPDASYQAGARQFPMLVPISPDDPATPANRKAWAALGRFEKPFLSAFSDSDPITGAAEPVLRGHVPGARGQSHVTIAGAGHFLQEDKGRELAEAVVTFVRAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169498 for 2707 contacts (-62.6/contact) +
2D Compatibility (PS) -31894 + (NN) -18781 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 8500
Total energy: -254865.0 ( -94.15 by residue)
QMean score : 0.527
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