Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWDKPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIK-ASHFIQEDSGTELAERMLSWQQAT
4MJ3 Chain:A ((2-301))-DVLRTPDERFTALPDFPFAPRYVEVDSGDGGTLRMHYLDEGRSDGEVVLLLHGEPSWSYLYRWMIPVLVEAGLRAVAIDLVGFGRSDKPTSRDDYTYQAHVDWMWAAIEEIGLADVTLVCQDWGGLIGLRLVGEHPDRFARVVAANTMLPTGDHHPGEAFLAWQKFSQEVPLFPAGQIVNGGSLSTLSAETIAAYDAPFPDASYQAGARQFPMLVPISPDDPATPANRKAWAALGRFEKPFLSAFSDSDPITGAAEPVLRGHVPGARGQSHVTIAGAGHFLQEDKGRELAEAVVTFVRAN


General information:
TITO was launched using:
RESULT:

Template: 4MJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169498 for 2707 contacts (-62.6/contact) +
2D Compatibility (PS) -31894 + (NN) -18781 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 8500
Total energy: -254865.0 ( -94.15 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_4MJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MJ3-query.scw
PDB file : Tito_Scwrl_4MJ3.pdb: