Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVWLRAGALVAAVMLSLSGCGGFHAGAPSTAGPCEIVPNGTPAPKTPPATVPSSRNLATNPEIATGYRRDMTVVRTAHYAAATANPLATQVACRVLRDGGTAADAVVAAQAVLGLVEPQSSGIGGGGYLVYFDARTGSVQAYDGREVAPAAATENYLRWVSDVDRSAPRPNARASGRSIGVPGILRMLEMVHNEHGRTPWRDLFGPAVTLADGGFDISARMGAAISDAAPQLRDDPEARKYFLNPDGSPKPAGTRLTNPAYSKTLSAIASAGANAFYSGDIAHDIVAAASDTSNGRTPGLLTIEDLAGYLAKRRQPLCTTYRGREICGM--PSSGGVAVAATLGILEHFPMSDYAPSKVDLNGGRPTVMGVHLIAEAERLAYADRDQYIADVDFVRLPGGSLTTLVDPGYLAARAALISPQHSMGSARPGD-----FGAPTAVAPPVPEHGT----SHLSVVDSYGNAATLTTTVESSFGSYHLVDGF--ILNNQLSDFSAEPHATDGSPVANRVEPGKRPRSSMAPTLVFDHSSAGRGALYAVLGSPGGSMIIQFVVKTLVAMLDWGLNPQQAVSLVDFGAANSPHTNLGGENPEINTS-------DDGDHDPLVQGLRALGHR-----VNLAEQSSGLSAITRSEAGWAGGADPRREGAVMGDDA |
| 4Y23 Chain:A ((45-577)) | ---------------------------------------------------------------------------------VATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPD--MFLDEDGKVIPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLS-KTAAKDIFL-PDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTP-----DDLSRYEVTTDKPIWGEYHGYDIASMPPPSSGGVFMLQMLKLIDDFHLSQYDPKSFE---------KYHLLAETMHLSYADRAAYAGDPEFVDVP---LRGLLDPDYIKERQKLISLDSMNRDVKEGDPWKYEEGEPNYEIVPQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDAIPGG------ANEVQPNKRPLSSMTPTIVFKDEKP-----VLTVGSPGGTTIIASVFQTILNYFEYGMSLQDAI-----------------EEPRIYTNSLTSYRYESGMPEDVRRKLNDFGHKFGSNPVDIGNVQSIF--IDRENKTFMGVADSSRNGTAVG--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155339 for 4740 contacts (-32.8/contact) +
2D Compatibility (PS) -54784 + (NN) -30353 + (LL) 4332
1D Compatibility (HY) -34800 + (ID) 9600
Total energy: -280544.0 ( -59.19 by residue)
QMean score : 0.452
|
|
|