Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4PZA Chain:A ((3-219))
--ARRLVMLRHGQTD-----RMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHW-----FESIRWRLDVWNASAQVS----
General information:
TITO was launched using:
RESULT:
Template:
4PZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74775 for 1732 contacts (-43.2/contact) +
2D Compatibility (PS) -22943 + (NN) -14523 + (LL) 304
1D Compatibility (HY) -24800 + (ID) 10350
Total energy: -147087.0 ( -84.92 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_4PZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PZA-query.scw
PDB file :
Tito_Scwrl_4PZA.pdb
: