Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS
4W4L Chain:A ((7-90))
------NPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYRQTIAAAAVVLEEFAHALTTGADKYATA---------
General information:
TITO was launched using:
RESULT:
Template:
4W4L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5933 for 471 contacts (-12.6/contact) +
2D Compatibility (PS) -9310 + (NN) -6078 + (LL) 1276
1D Compatibility (HY) -8800 + (ID) 4200
Total energy: -33045.0 ( -70.16 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_4W4L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W4L-query.scw
PDB file :
Tito_Scwrl_4W4L.pdb
: