Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
1K44 Chain:A ((2-136))
-TERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
General information:
TITO was launched using:
RESULT:
Template:
1K44.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82615 for 1023 contacts (-80.8/contact) +
2D Compatibility (PS) -14714 + (NN) -6293 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 6750
Total energy: -126564.0 ( -123.72 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_1K44.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K44-query.scw
PDB file :
Tito_Scwrl_1K44.pdb
: