Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
5DZK Chain:A ((15-210))
--------------ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLS----
General information:
TITO was launched using:
RESULT:
Template:
5DZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113263 for 1437 contacts (-78.8/contact) +
2D Compatibility (PS) -21746 + (NN) -12562 + (LL) 1332
1D Compatibility (HY) -27200 + (ID) 9800
Total energy: -183239.0 ( -127.51 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_5DZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DZK-query.scw
PDB file :
Tito_Scwrl_5DZK.pdb
: