Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
1XKF Chain:A ((8-130))
-TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELA---IYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLP-------------------
General information:
TITO was launched using:
RESULT:
Template:
1XKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89761 for 922 contacts (-97.4/contact) +
2D Compatibility (PS) -12994 + (NN) -5032 + (LL) 2280
1D Compatibility (HY) -16000 + (ID) 5950
Total energy: -127457.0 ( -138.24 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1XKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XKF-query.scw
PDB file :
Tito_Scwrl_1XKF.pdb
: