Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGVTICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEHRR
2BPF Chain:A ((93-140))
----------------------------------------------------------------------------------------------TSSSINFL-TRVTGIGPSAARKLVDE---GIKTLEDLRKNEDKLNHHQR
General information:
TITO was launched using:
RESULT:
Template:
2BPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2911 for 269 contacts (-10.8/contact) +
2D Compatibility (PS) -4784 + (NN) -659 + (LL) 4348
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -7006.0 ( -26.04 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2BPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BPF-query.scw
PDB file :
Tito_Scwrl_2BPF.pdb
: