Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARSDAGGQSVKSRTSNRSRSSRRSRVRSSISALVDNPQARPRELPVLCGWPVVRVEPVCEFVPEPVCGQAEVLGEPAAAHRVTSARRSPSTTVCSRSQKASAVVISSVSSVARVRRASVSSVDATTA
4D48 Chain:A ((119-150))
-----------------------------------------------VMCAWPVIGNEPVAVILPDVILDEYE--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4D48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5990 for 77 contacts (-77.8/contact) +
2D Compatibility (PS) -2723 + (NN) -1604 + (LL) 6288
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -8129.0 ( -105.57 by residue)
QMean score : -0.048
(partial model without unconserved sides chains):
PDB file :
Tito_4D48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D48-query.scw
PDB file :
Tito_Scwrl_4D48.pdb
: