Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
3LF0 Chain:A ((3-114))
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGR---------------DFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
General information:
TITO was launched using:
RESULT:
Template:
3LF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74423 for 651 contacts (-114.3/contact) +
2D Compatibility (PS) -10563 + (NN) -2079 + (LL) 928
1D Compatibility (HY) -14800 + (ID) 4850
Total energy: -105787.0 ( -162.50 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_3LF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LF0-query.scw
PDB file :
Tito_Scwrl_3LF0.pdb
: