Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDLAAHVRPFGVPFIHIPATRDTRTEAEQRQLQLLSGN-VDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF
3W7B Chain:A ((4-284))
------------------------------ARLLVTCPDRPGIVAAVSGFLYAHGANITDLQQHSTDPEGGTFFMRVAFTASHLDLARPALERAFQEVVASRFQMQWRLAYASERKRTAILVSKPAHALLELLWRYRVGELPMELRLVISNHPDHREEVERFGIPYHHVPVEKGRKEEAEERILALLEAEGVELVVLARYMQILSPGFVERFPMRIINIHHSFLPAFAGADPYRQAYERGVKLIGATAHYVTEELDQGPIIEQDVVRVSHRHSVREMKRLGRELERTVLARAVRWHLEDRILVHENRTVVF
General information:
TITO was launched using:
RESULT:
Template:
3W7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -238940 for 2190 contacts (-109.1/contact) +
2D Compatibility (PS) -29872 + (NN) -12095 + (LL) -888
1D Compatibility (HY) -30800 + (ID) 8150
Total energy: -320745.0 ( -146.46 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3W7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W7B-query.scw
PDB file :
Tito_Scwrl_3W7B.pdb
: