Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
3P9N Chain:A ((2-185))
MTRIIGGVAGGRRIAVPPRG---TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERL----
General information:
TITO was launched using:
RESULT:
Template:
3P9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100550 for 1501 contacts (-67.0/contact) +
2D Compatibility (PS) -20115 + (NN) -12612 + (LL) 400
1D Compatibility (HY) -22800 + (ID) 9050
Total energy: -164727.0 ( -109.74 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_3P9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9N-query.scw
PDB file :
Tito_Scwrl_3P9N.pdb
: