Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPAKKATKAAKKAATKAPARKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKASVRKAATKAPAKKAAAKRPATKAPAKKATARRGRK
4DKY Chain:A ((1-97))
MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPA---------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11800 for 519 contacts (-22.7/contact) +
2D Compatibility (PS) -10652 + (NN) -5480 + (LL) 8828
1D Compatibility (HY) -10400 + (ID) 4850
Total energy: -34354.0 ( -66.19 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4DKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DKY-query.scw
PDB file :
Tito_Scwrl_4DKY.pdb
: