Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
3H5H Chain:A ((3-168))
--AFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153707 for 1352 contacts (-113.7/contact) +
2D Compatibility (PS) -18209 + (NN) -11392 + (LL) 2580
1D Compatibility (HY) -23600 + (ID) 8300
Total energy: -212628.0 ( -157.27 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3H5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H5H-query.scw
PDB file :
Tito_Scwrl_3H5H.pdb
: