Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVVAGNDHWSGFRPDRIKALAGAALTA
4HS1 Chain:A ((2-79))
-TVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVVAGNDHWSGFRPDRIKALAGAALTA
General information:
TITO was launched using:
RESULT:
Template:
4HS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40698 for 532 contacts (-76.5/contact) +
2D Compatibility (PS) -8168 + (NN) 33 + (LL) 208
1D Compatibility (HY) -10400 + (ID) 3900
Total energy: -62925.0 ( -118.28 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_4HS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HS1-query.scw
PDB file :
Tito_Scwrl_4HS1.pdb
: