Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPNAASTGDSAKNTITGCCLITARALVARTRSISLPGMPFRMPADYHNASSDEPTNRHPWPAPARCCRHEWRTMRRTNACDRRRFGLSLTIHEDACRIISVVPVVLEVRRAEPAHPATPYPEPLARCSRSPGLNESSHMSGRIPP |
1VRQ Chain:A ((843-885)) | ----------------------------------------------------------------------EWVVSKLKDFVGKRSFSREDNVREDRKHLVSVLPVDSSLRLAE--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -358 for 135 contacts (-2.7/contact) +
2D Compatibility (PS) -4323 + (NN) 1374 + (LL) 3320
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -2237.0 ( -16.57 by residue)
QMean score : -0.102
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