Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
1G3U Chain:A ((1-208))
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLA------
General information:
TITO was launched using:
RESULT:
Template:
1G3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110824 for 1749 contacts (-63.4/contact) +
2D Compatibility (PS) -23647 + (NN) -17501 + (LL) -332
1D Compatibility (HY) -24400 + (ID) 10400
Total energy: -187104.0 ( -106.98 by residue)
QMean score : 0.877
(partial model without unconserved sides chains):
PDB file :
Tito_1G3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3U-query.scw
PDB file :
Tito_Scwrl_1G3U.pdb
: