Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
2KN9 Chain:A ((22-81))
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
General information:
TITO was launched using:
RESULT:
Template:
2KN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10518 for 366 contacts (-28.7/contact) +
2D Compatibility (PS) -6596 + (NN) -6677 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3000
Total energy: -35191.0 ( -96.15 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2KN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KN9-query.scw
PDB file :
Tito_Scwrl_2KN9.pdb
: