Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLA-----LLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQPPPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP
3H0G Chain:A ((1261-1344))
-----------------------------------EEDVFLKTIEGHMLESISLRGVPNITRVYMMEHKIVRQIEDGTFERADEWVLETDGINLTEAMTVEGVDATRTYSNSFVEILQI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11938 for 371 contacts (-32.2/contact) +
2D Compatibility (PS) -8216 + (NN) -1523 + (LL) 3304
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -25023.0 ( -67.45 by residue)
QMean score : 0.055
(partial model without unconserved sides chains):
PDB file :
Tito_3H0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0G-query.scw
PDB file :
Tito_Scwrl_3H0G.pdb
: