Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAGG
2BM4 Chain:A ((2-182))
-QQWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCLAG-
General information:
TITO was launched using:
RESULT:
Template:
2BM4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149871 for 1721 contacts (-87.1/contact) +
2D Compatibility (PS) -18848 + (NN) -254 + (LL) 36
1D Compatibility (HY) -24400 + (ID) 9000
Total energy: -202337.0 ( -117.57 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2BM4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BM4-query.scw
PDB file :
Tito_Scwrl_2BM4.pdb
: