Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRC--AYFTELRARGGDSA--------RTRSCPRLTDSIEHAVAEGYLEHHDPNR |
3AGR Chain:A ((14-66)) | -------------------------------------------------------------------------------------TEKHISAGKARLQDLRDAERRCHDAWQAIVVIDGGSSATRTNVFLAKTRSCPR--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -901 for 130 contacts (-6.9/contact) +
2D Compatibility (PS) -4467 + (NN) 65 + (LL) 5340
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -2113.0 ( -16.25 by residue)
QMean score : 0.124
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