Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIARHKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
3O38 Chain:A ((6-264))
-NLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARH-----------------DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ--
General information:
TITO was launched using:
RESULT:
Template:
3O38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127806 for 2099 contacts (-60.9/contact) +
2D Compatibility (PS) -26450 + (NN) -6573 + (LL) 1728
1D Compatibility (HY) -27200 + (ID) 10350
Total energy: -196651.0 ( -93.69 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3O38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O38-query.scw
PDB file :
Tito_Scwrl_3O38.pdb
: