Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVYCELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAEDPV-KVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
1P59 Chain:A ((17-208))
-----------------------MAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSTAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLC-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118544 for 1498 contacts (-79.1/contact) +
2D Compatibility (PS) -19887 + (NN) -8456 + (LL) 3420
1D Compatibility (HY) -16800 + (ID) 4350
Total energy: -164617.0 ( -109.89 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1P59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P59-query.scw
PDB file :
Tito_Scwrl_1P59.pdb
: